Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955006.1_cds_XP_016493693.1_83778
CDS Infomation

[gene=LOC107813008] [db_xref=GeneID:107813008] [protein=serine/threonine-protein kinase 4-like] [protein_id=XP_016493693.1] [location=complement(join(143563..143601,143786..143837,143913..143971,144350..144396,144555..144597,144667..144783,145312..145388,145527..145603,146277..146543,147494..147567,147777..147899,148008..148076,148328..148393,148498..148668,148735..148803,148904..148985,149069..149113,149240..149364,149834..150061))] [gbkey=CDS]
Sequence

ATGATCTTGATTGATCATGCAAATGTATTGCGTGCACACTGCTCCTTCACTGCAGGTCAC
AGCCTTTGGGTTGTCATGCCATTCATGGCCGGAGGATCTTGCCTTCATATTATGAAATCT
TCTTATCCTGATGGTTTTGAGGAGCCTGTAATTGCCACATTATTGCGTGAGGTCCTCAAA
GCCCTTGTATATCTTCATTACCATGGACACATCCATAGAGATGTAAAGGCTGGGAATATT
TTGATTGATTCCGATGGTGCTGTTAAATTGGCAGATTTTGGAGTTGCAGCTTGCATGTTT
GATACTGGTGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACTCCATGCTGGATGGCT
CCCGAAGTGATGCAGCAACTGCATGGATATGATTTTAAAGCAGATATTTGGTCGTTTGGA
ATAACAGCCCTTGAACTTGCTCATGGTCATGCGCCATTCTCCAAGTACCCACCCATGAAG
GTTCTGCTGATGACCTTACAGAATGCACCCCCAGGCCTTGACTATGAACGGGACAAGAGA
TTCTCTAAGTCTTTTAAAGAAATGGTTGCTGCTTGCTTAGTGAAAGATCCAAAGAAGCGT
CCATCTTCTGAGAAGCTTTTGAAGCACCCTTTCTTTAAACAAGCACGATCAAATGATTAT
TTGGCACGTTCAATCCTTGATGGCCTCCCACCTCTAGGTGATCGTTTTAGGATGCTTAAG
GCAAAAGAAGCAGATTATCTCTTACAGAACAAGGCAATGTATGAGGACAAGGATCATTTA
TCACAGCAAGAGTATATTCGTGGTATCAGTGCCTGGAATTTTAACCTGGAGGATCTGAAG
AGCCAAGCTGCGCTGCTTCCGGATTATGACGACATTCCAGATGCTGAAGATTCAAGTACT
AGTGGGAAGCTGCGGGAGGGGAATGGTGATATTGGTTCTATAGCAGAAAGGCCTAATCAG
CCAAGTGTTTCTCATGAGGATGAGCTGAATGATGATCATGATTTGGACAGTTCACTTGCT
GCATTTCCTATGAAGCCTCTTCAAGCACTCAAGGGGTGTTTTGATGTGTGCGAAGATGAC
ATAACTGGTAGTAGTCCAAGTTGGGAAGATGCTATGCAATCAGAGTCTAATCAGCAGAAC
CTTATGCTGTCACCGGCAAAAGTTGAGGACCAAGACAATGGAAAAGATGATGGTGAGAAT
CTGCGACAGAGTAGCTCCTTGCCACGTTCTGTTATTCCAGGGCATAAAAAGTTTTTTAGT
GGTTCACTGCTACAGGATAATGCTCTTTCACCCAAAAAAGTTGTTACTGATGGCGAGAGG
GAATATCAACATCCAAAGTACCAGGCCGAACGAAACTATAGCGGTCCATTGCAGTATCGA
CATAAGAAAGACTTAGGAGAAGATGCATCAGAAGGAGCTGTCGTCCAACGCAAGGGACGT
TTTCAAGTCACATCAGCAGATCTGAGTCCCAAGGAACCTACAAGCTGTTTCTTTAACCCA
GGTCATGGAGGTTCTACTAGTCCAAGCAATCTAGTTGCTTCACTACTTCCATCATTGCAA
TGCATTCTACAACAGAATACTTTGCAAAGGGAGGAAATAGTGAAACTGATCAAGTTTGCG
GAGCGAGCATCTGTCAACCCTACAGACTTGGCTGAAGCTGGGACCAGTGATCTTCCGCAG
ATGTCTCCTTCTGTTAGGGAGAGAGAACTGCAATCTATGGTCATTCAAATGCAACAAAGC
ATTGGAAGTCTTGTGGAGGAGTTGCAGAGACAAAAGATGAAGAATATTCAGTTGGAAAAG
AAATTGAATACAGTGGTAAAGAAAGAATAG

Peptide Sequence

PEP ID

XP_016493693.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase 4-like [Nicotiana tabacum]
Sequence

MILIDHANVLRAHCSFTAGHSLWVVMPFMAGGSCLHIMKSSYPDGFEEPVIATLLREVLK
ALVYLHYHGHIHRDVKAGNILIDSDGAVKLADFGVAACMFDTGDRQRSRNTFVGTPCWMA
PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR
FSKSFKEMVAACLVKDPKKRPSSEKLLKHPFFKQARSNDYLARSILDGLPPLGDRFRMLK
AKEADYLLQNKAMYEDKDHLSQQEYIRGISAWNFNLEDLKSQAALLPDYDDIPDAEDSST
SGKLREGNGDIGSIAERPNQPSVSHEDELNDDHDLDSSLAAFPMKPLQALKGCFDVCEDD
ITGSSPSWEDAMQSESNQQNLMLSPAKVEDQDNGKDDGENLRQSSSLPRSVIPGHKKFFS
GSLLQDNALSPKKVVTDGEREYQHPKYQAERNYSGPLQYRHKKDLGEDASEGAVVQRKGR
FQVTSADLSPKEPTSCFFNPGHGGSTSPSNLVASLLPSLQCILQQNTLQREEIVKLIKFA
ERASVNPTDLAEAGTSDLPQMSPSVRERELQSMVIQMQQSIGSLVEELQRQKMKNIQLEK
KLNTVVKKE

Transcript Sequence

Gene sequence data has not been registered.